BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G04LP1|AL426576
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1687 0.0
>3x_Contig1793
Length = 40499
Score = 1687 bits (851), Expect = 0.0
Identities = 858/859 (99%), Gaps = 1/859 (0%)
Strand = Plus / Minus
Query: 1 tggtcttattctcttccaatcttcgttcaccgcttgcagaatatgcggaatgagaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33499 tggtcttattctcttccaatcttcgttcaccgcttgcagaatatgcggaatgagaagcac 33440
Query: 61 tagtactgtactcgatctgatgcttggaaatttcttgtcccaatctgttgaaaagaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33439 tagtactgtactcgatctgatgcttggaaatttcttgtcccaatctgttgaaaagaatca 33380
Query: 121 cacgtgaagatgtggtaccgacatcaatagcagcaactaacggaaccacctctttttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33379 cacgtgaagatgtggtaccgacatcaatagcagcaactaacggaaccacctctttttctg 33320
Query: 181 tatcggacttaataactaactctttctcagtcatatctgctgcaataaaagtctgctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33319 tatcggacttaataactaactctttctcagtcatatctgctgcaataaaagtctgctgtt 33260
Query: 241 atcttgctctattccacctgatgctacgtttcattataaatttgaatcattaataatacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33259 atcttgctctattccacctgatgctacgtttcattataaatttgaatcattaataatacc 33200
Query: 301 ttcttcgacctatgatacctttcgaaaaggaaacagtttatatacaagattcacaagggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33199 ttcttcgacctatgatacctttcgaaaaggaaacagtttatatacaagattcacaagggt 33140
Query: 361 aataccatatgagaaactcctcttgtccacttaaaaaaaaacatatcgactcgagatggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33139 aataccatatgagaaactcctcttgtccacttaaaaaaaaacatatcgactcgagatggg 33080
Query: 421 ccatctaagatatctcttgtctagaaacttgtgaatgagtcaaaaaaaaaaaaaaatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33079 ccatctaagatatctcttgtctagaaacttgtgaatgagtcaaaaaaaaaaaaaaatata 33020
Query: 481 gaagggataccaccaaaggaacataaggttgcaagaggccgcgttgcctacaaaacgcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33019 gaagggataccaccaaaggaacataaggttgcaagaggccgcgttgcctacaaaacgcag 32960
Query: 541 cagtagaaaaaggcatcaaccatactgagcaacttctttcaaaggaaactgaattctgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32959 cagtagaaaaaggcatcaaccatactgagcaacttctttcaaaggaaactgaattctgaa 32900
Query: 601 tacaaaaaaggtgcataccccatataaatttttattcctcttctccattcctaggtaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32899 tacaaaaaaggtgcataccccatataaatttttattcctcttctccattcctaggtaacc 32840
Query: 661 ttctttcggagaaattttttctttgccttaagcaaattgtatttagttctattctgcaac 720
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 32839 ttctttcggagaaattttttctttgccttaagcaaattgtatttagttc-attctgcaac 32781
Query: 721 cgctactattgtttgctataaaaataggtagtaatgtctgctggaaagattgccgttgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32780 cgctactattgtttgctataaaaataggtagtaatgtctgctggaaagattgccgttgct 32721
Query: 781 atagaatttaaatcctagccgggtcatatttcctttgaatttttcgcctttttgtgccta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32720 atagaatttaaatcctagccgggtcatatttcctttgaatttttcgcctttttgtgccta 32661
Query: 841 tttttacttgggttgtttc 859
|||||||||||||||||||
Sbjct: 32660 tttttacttgggttgtttc 32642
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,018
Number of Sequences: 1807
Number of extensions: 17018
Number of successful extensions: 2260
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)